Hi Emanuel,
can you include the full command line and output?
cheers Bruce On Wed, 12 Dec 2018, Emanuel Alvaredo wrote:
External Email - Use Caution
Thanks for your answer Douglas. I replaced the make_average_surface file with the new one but I have the same message error. ASeg Vox2RAS: ----------- -1.00000 0.00000 0.00000 128.00000; 0.00000 0.00000 1.00000 -128.00000; 0.00000 -1.00000 0.00000 128.00000; 0.00000 0.00000 0.00000 1.00000; mghRead(mri/norm.mgz, -1): could not open file
Labeling Slice relabeling unlikely voxels in interior of white matter mri/norm.mgz: could not load norm volume from (null)
Linux neuroWorkstation00 4.4.0-138-generic #164-Ubuntu SMP Tue Oct 2 17:16:02 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux
Thanks
Emanuel
On Tue, Dec 11, 2018 at 1:10 PM Greve, Douglas N.,Ph.D. DGREVE@mgh.harvard.edu wrote: Sorry, the disk that held that patch failed and we did not have a backup so not everything was restored. I just put this file there:
https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/6.0.0-patch/make_average_surface Copy it to $FREESURFER_HOME/bin. Let me know how it goes On 12/10/18 12:48 PM, Emanuel Alvaredo wrote: External Email - Use Caution Thanks Bruce. The following is the command.make_average_subject --out avgsubjectPRUEBAESTASIEmac --subjects subject1 subject2 subject3
And I made a mistake in may last mail. I use the word path instead of patch
I have found this page with a patch for de issue
https://mail.nmr.mgh.harvard.edu/pipermail//freesurfer/2018-February/056008....
But I dont know how to apply the patch. Can you give some information about this?
Emanuel
On Fri, Dec 7, 2018 at 4:54 PM Bruce Fischl fischl@nmr.mgh.harvard.edu wrote: Hi Emanuel
you need to send us the full command you ran and output of it if you want us to be able to help you cheers Bruce On Fri, 7 Dec 2018, Emanuel Alvaredo wrote: > > External Email - Use Caution > > Hello!, I am getting the following error using the command make_average_subject > > mri/norm.mgz: could not load norm volume from (null) > > I have found this page with a path for de issue > > https://mail.nmr.mgh.harvard.edu/pipermail//freesurfer/2018-February/056008.html > > But I dont know how to apply the path. Can you give some information about this? > > Thanks! > > > > Emanuel > >_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer