It should be created by recon-all. Check that subject to see whether it finished or had an error
On 2/24/17 3:17 PM, Limachia, Gaurang (NIH/NINDS) [F] wrote:
Hello Freesurfer Experts,
I received this error while running the make_avg_subject script. I would greatly appreciate it if you can point me in the right direction.
Also, I do not know how the aparc.annot file is supposed to be created.
/not aligning hemispheres before averaging./
/zeroing medial wall in aparc/
/creating new parameterization.../
//
/processing subject CON_201 (1 of 98)/
/reading spherical surface /raids/hmcsraid3/silvina/PMD_FATCAT2015/CON_201/surf/lh.sphere.reg.../
/could not read annot file /raids/hmcsraid3/silvina/PMD_FATCAT2015/CON_201/surf/../label/lh.aparc.annot/
/No such file or directory/
/mris_make_template: could not read annot file aparc/
/No such file or directory/
/ERROR: make_average_surface/
Thanks,
Gaurang Shyam Limachia
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer