This is actually a bug :(. You can get around it by feeding it a "conformed" volume, but you are going to run into another problem with another bug. We are working to fix them. I think we should have a fix in a day or so.
On 9/21/2022 4:17 PM, Markus Handal Sneve wrote:
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Hi,
I’m testing mri_sclimbic_seg in the new FS version (7.3.2). My structurals are 0.8mm isotropic, so I’m adding the —conform flag, but still get this error:
Any ideas? And, BTW, I had to set the environmental variable HDF_USE_FILE_LOCKING to FALSE to get the tool running. Perhaps a tip to add to the wiki, if not people can now see it here.
Thanks for your great work! Cheers, Markus
Markus Handal Sneve, Ph.D. Center for Lifespan Changes in Brain and Cognition Department of Psychology University of Oslo
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
