[Freesurfer] mask volume calculation

Ehsan Tadayon

1 Nov 2017 1 Nov '17

10:24 p.m.

Hello FS experts,

I'm trying to get the volume of a binary mask on orig.mgz. I know that FS uses a more sophisitcated approach than simply counting the number of voxels within the mask and I'd like to apply the same approach. Is there any way to get the volume for a defined mask with the same approach that FS computes the volumes for aseg.mgz?

thanks. Ehsan

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