Can you view the original aseg.mgz in slicer?
doug
Jose Angel Pineda Pardo wrote:
Hi everyone,
Im using the instruction mri_label2vol, to resample the resulting aseg.mgz into the original Dicom Volume (same dimension as rawavg.mgz), as follows:
/mri_label2vol --seg /Users/jangel85/Desktop/ejemplo/Results_FreeSurfer/mri/aseg.mgz --regheader /Users/jangel85/Desktop/ejemplo/Results_FreeSurfer/mri/aseg.mgz --o aseg-in-rawavg.mgz --temp /Users/jangel85/Desktop/ejemplo/Results_FreeSurfer/mri/rawavg.mgz /
The problem that Im having, is that the resulting aseg-in-rawavg.mgz, has no names associated to the labels when I plot it in the Software that Im using (3D Slicer). Does anyone know, why is that happening and how can I correct it?
Thanks in advance
Jose
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