Re: [Freesurfer] display amygdala only in tkmedit?

Hi Ariel You can use mri_binarize to extract just the label you want and visualize is (or mri_extract_label) Cheers Bruce

On Jun 15, 2011, at 4:48 PM, Ariel Brown ariel@nmr.mgh.harvard.edu wrote:

Hi There, I'm trying to come up with an image of the amygdala to display on a single subject's brainmask.mgz. Can I display the aseg labels individually in tkmedit?

Thanks so much, Ariel

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Ariel Brown, PhD

Research Fellow Department of Psychiatry Mass General Hospital & Harvard Medical School

Visiting Scientist Department of Brain & Cognitive Sciences Massachusetts Institute of Technology

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