Hi Reagan, I was not able to recreate this error. Can you send me the full terminal output? thanks doug
Wetherill, Reagan wrote:
Hello FreeSurfers!
I am new to FSFast and am attempting to run selxavg3-sess, but I keep receiving the following errors:
ERROR: model ??? In an assignment A(:) = B, the number of elements in A and B must be the same.
Error in ==> fast_ldanaflac at 391 flac.ev(nthev) = flac_ev_parse(tline);
Error in ==> fast_selxavg3 at 45 flac0 = fast_ldanaflac(analysis);
ERROR: fast_selxavg3() failed\n
Here are my commands for mkanalysis and mkcontrast
# FSBUILD freesurfer-Linux-centos4_x86_64-stable-pub-v5.0.0 # MKAVERSION $Id: mkanalysis-sess,v 1.49.2.3 2010/07/30 16:51:11 greve Exp $ # MKACMD /usr/local/freesurfer5/fsfast/bin/mkanalysis-sess -a try -mni305 2 -fwhm 6 -event-related -p vwm.par -TR 2 -nc 3 -spmhrf 0 -refeventdur 4 -polyfit 2 -hpf .08 -nskip 4 -nuisreg wm.dat 3 -nuisreg vcsfreg.dat 3 -nuisreg global.waveform.dat 1 -mcextreg -fsd bold # DATE Tue Apr 19 12:17:42 PDT 2011
analysis try mcstem fmcpr fsd bold TR 2 RegDOF 6 RawSpace volume mni305 2 mask brain RawFWHM 6 RawSTC none inorm 100 acfbins 30 fixacf 1 acffwhm 20 acfsvd 0 designtype event-related nskip 4 polyfit 2 HPFCutoffHz .08 nconditions 3 parname vwm.par RefEventDur 4 timewindow 40.000000 prestim 0 TER 0.050000 spmhrf 0 stimulusdelay 0 Condition 1 Condition01 Condition 2 Condition02 Condition 3 Condition03 nuisreg wm.dat 3 nuisreg vcsfreg.dat 3 nuisreg global.waveform.dat 1 nuisreg mcprextreg 3
mkcontrast-sess -analysis try -contrast six-v-two -a 3 -c 1
selxavg3-sess -sf sess_test -analysis try
THANKS IN ADVANCE!! Reagan
Reagan Wetherill, Ph.D. Postdoctoral Fellow Department of Psychiatry University of California, San Diego 8950 Villa La Jolla Drive. Suite C213 San Diego, CA 92037-0862 Phone: 858-822-3400 Fax: 858-822-3933 _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer