Can you run tkregisterfv --debug --mov pet.nii.gz --targ T1.nii --reg pet_T1.reg.lta and send the terminal output?
On 10/2/2019 3:58 PM, Vicky Yang wrote:
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Dear Freesurfer experts,
I used mri_coreg to register my pet data to T1 like below:
mri_coreg --mov pet.nii.gz --ref T1.nii --reg pet_T1.reg.lta
After coregistering, I checked the registration using tkregisterfv like below:
tkregisterfv --mov pet.nii.gz --targ T1.nii --reg pet_T1.reg.lta
However, the command didn't work with an error: if: Expression Syntax.
Any suggestions would be appreciated. Thank you in advance for your help.
Sincerely, Vicky
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