Can you add --debug as the first argument and send the terminal output?
On 05/19/2017 11:48 PM, Duy Nguyen wrote:
Dear FreeSurfer experts,
When I try to run mri_glmfit-sim, the output came out like this:
cmdline mri_glmfit.bin --y lh.gender_age.thickness.10.mgh --fsgd lh.gender-age.fsgd --C lh-Avg-thickness-FemaleMale.age.mtx --C lh-Avg-thickness-FemaleMale.intercept.mtx --C lh-Avg-thickness-Gender.diff.mtx --C lh-Avg-thickness-Gender*Age-Inter.mtx --surf fsaverage lh --cortex --glmdir lh.gender_age.glmdir SURFACE: fsaverage lh set: No match. [toibigi2007@localhost glm1]$ mri_glmfit-sim --help
After I ran the command line like the following: mri_glmfit-sim --glmdir lh.gender_age.glmdir --cache 2 neg --cwp 0.05 --2spaces
Please point me out what goes wrong with this command. Any help would be appreciated!
Thank you and warmest regards, *--v-- Peace --v--* *Duy Nguyễn * *Biomedical Engineering Department- IU HCMC* *Cell: (+84)909999056* *Email: duy.nguyenbme@gmail.com mailto:duy.nguyenbme@gmail.com*
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer