Hi Luigi,
1 is the right way of calling it. 2 will have a negative effect in the sense that it takes the same image twice and then creates the mid-space at the same location, so 2 could be biased. 1 is creating an artifical mid-space and makes sure the image gets mapped there.
Best, Martin
On 02/13/2013 08:39 AM, Luigi Angelo Maglanoc wrote:
Dear FreeSurfer experts,
I know that it is possible to submit data with only one timepoint into the longitudinal stream with FreeSurfer 5.2. My question is, what is the exact command? is it:
- recon-all -base <templateid> -tp <tp1id> -all
or 2) recon-all -base <templateid> -tp <tp1id> -tp <tp1id> -all I have accidently run them with the second command, and I am also wondering whether this will have a negative impact?
Thank you for your time and consideration!
Sincerely Luigi
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