use mri_convertcheck this linkhttps://surfer.nmr.mgh.harvard.edu/pub/docs/html/mri_convert.help.xml.html
Azeez Adebimpe
Date: Fri, 31 May 2013 13:23:20 +0200 From: anna.b.josefson@gmail.com To: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] Conversion
Dear FreeSurfer users!
I am new to Freesurfer, and I have succesfully managed to run recon-all on my data, for every subject.
Now I plan to use the output - some of the different cortical and subcortical brain structures as ROI's in my SPM analyses.
Then I would have to convert from freesurfer space to SPM space via the coordinates.
And - I would also have to convert from .mgz to .nii data format.
Does any have any tips on how to do this? Or a script?
Kind Regards, Anna B. Josefson
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