Dear experts
the problem is solved. the "line breaks" in the list file caused the problems because they were not really "carriage returns” when text file is saved out of Excel.
Regards Jürgen Hänggi
----------------------------------------------------------------------------------------------------- University of Zurich Dr. Jürgen Hänggi, Ph.D. Department of Psychology Division Neuropsychology Binzmuehlestrasse 14, PO Box 25 8050 Zurich, Switzerland
0041 44 635 73 97 (phone office) 0041 76 445 86 84 (phone mobile) 0041 44 635 74 09 (fax office) BIN 4.D.04 (office room number)
j.haenggi@psychologie.uzh.ch (email) http://www.psychologie.uzh.ch/neuropsy/ (website) http://www.juergenhaenggi.ch (private website)
This email (and any attachment/s) contains confidential and/or privileged information. If you are not the intended recipient (or have received this email in error) please notify the sender immediately and destroy this email. Any unauthorised copying, disclosure or distribution of the material in this email is strictly forbidden. -----------------------------------------------------------------------------------------------------
On 19 Dec 2017, at 09:52, Juergen Haenggi j.haenggi@psychologie.uzh.ch wrote:
Dear FS and TRACULA experts
I use FS6 on a Mac and I am trying to extract path statistics using the tractstats2table command, but faced the following error always for the last file in the list:
…. /dpath/lh.ilf_AS_avg33_mni_bbr/pathstats.overall.txt is not found or is too small to be a valid statsfile
if I replace the last subject by another subject of the list for which no error occurred, then the error will occurr for that subject also.
although the problem is also reported by others on the FS mailing list, no solution is offered.
Thanks in advance Regards Jürgen Hänggi
University of Zurich Dr. Jürgen Hänggi, Ph.D. Department of Psychology Division Neuropsychology Binzmuehlestrasse 14, PO Box 25 8050 Zurich, Switzerland
0041 44 635 73 97 (phone office) 0041 76 445 86 84 (phone mobile) 0041 44 635 74 09 (fax office) BIN 4.D.04 (office room number)
j.haenggi@psychologie.uzh.ch mailto:j.haenggi@psychologie.uzh.ch (email) http://www.psychologie.uzh.ch/neuropsy/ http://www.psychologie.uzh.ch/neuropsy/ (website) http://www.juergenhaenggi.ch http://www.juergenhaenggi.ch/ (private website)
This email (and any attachment/s) contains confidential and/or privileged information. If you are not the intended recipient (or have received this email in error) please notify the sender immediately and destroy this email. Any unauthorised copying, disclosure or distribution of the material in this email is strictly forbidden.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.