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Has anyone else tried to do recon-all with Sagittal 3D T1 post-contrast volumes?
We're getting hung in recon-all at the Talairach registration step, and I wonder if the vascular enhancement at the pial surface might be throwing the algorithm off. About half the scans will run smoothly, but the other half --- not so much.
Another question is whether a linear registration (e.g., using David MacDonald's register program) would allow us to do the recon-all ... -notal option?
Thanks, John
John R. Absher, MD, FAAN GHS Neurosciences jabsher@ghs.orgmailto:jabsher@ghs.org 864-350-6655 (mobile)