Looks like that is a pretty weak computer. Can you run it on a stronger computer?
Rodrigo Zepeda wrote:
Hi,
I'm getting an error trying to run a reconstruction.
I'm working on multnomah and my subjects directory is: /autofs/space/multnomah_002/users/Cashlab/
I'm using the following command:
[multnomah:Cashlab] (nmr-std-env) recon-all -autorecon1 -autorecon2 -subject MG25_SurferOutput -i MG25/MRI/1.3.12.2.1107.5.2.30.26039.3.2007081618514610873067809.dcm
I get the following error:
writing labeled volume to aseg.auto_noCCseg.mgz... ERROR: opening pipe gzip -f -c > aseg.auto_noCCseg.mgz, errno = 12 Cannot allocate memory mri_ca_label: MRIwrite(aseg.auto_noCCseg.mgz) failed
My environment information is:
-------- freesurfer-Linux-centos4-stable-v4.5.0-20090823 -------- Setting up environment for FreeSurfer/FS-FAST (and FSL) FREESURFER_HOME /usr/local/freesurfer/stable4 FSFAST_HOME /usr/local/freesurfer/stable4/fsfast FSF_OUTPUT_FORMAT nii SUBJECTS_DIR /autofs/space/multnomah_002/users/Cashlab MNI_DIR /usr/local/freesurfer/stable4/mni FSL_DIR /usr/pubsw/packages/fsl/current
Any help will be appreciated!
Thanks,
Rodrigo
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