By a volume file, do you mean a binary mask inside of a volume? If so, you should run mri_vol2surf to convert it into a surface overlay (binary mask), then use mri_cor2label with the --surf option
On 01/27/2017 05:08 AM, francesca bottino wrote:
Dear FS's experts, I have this problem: I want transform a volume file .nii in surfaces files .label. I had tried the command cor2label but I don't know very well how to use it. Please help me. Tnks
*Da:* freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu per conto di freesurfer-request@nmr.mgh.harvard.edu freesurfer-request@nmr.mgh.harvard.edu *Inviato:* giovedì 26 gennaio 2017 18.00 *A:* freesurfer@nmr.mgh.harvard.edu *Oggetto:* Freesurfer Digest, Vol 155, Issue 41 Send Freesurfer mailing list submissions to freesurfer@nmr.mgh.harvard.edu
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Today's Topics:
- Longitudinal stream with v6 but cross with v5.3 (Matthieu Vanhoutte)
- Re: Hippocampal Subfields Segmentation Error (Iglesias Gonzalez, Eugenio)
- Re: longitudinal tracula error (Yendiki, Anastasia)
- Re: freesurfer 6.0 with some of the analyses (Rizvi, Batool)
- Re: Command for Reverse Normalizing with mri_vol2vol Using CVS m3z Morphs (Lilla Zollei)
- Re: freesurfer 6.0 with some of the analyses (Adam Martersteck)
- Re: freesurfer 6.0 with some of the analyses (Iglesias Gonzalez, Eugenio)
Message: 1 Date: Thu, 26 Jan 2017 09:58:30 +0100 From: Matthieu Vanhoutte matthieuvanhoutte@gmail.com Subject: [Freesurfer] Longitudinal stream with v6 but cross with v5.3 To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Message-ID: CAF6uKJSd96orkeH+WWX5T6jz3xeYtTNiJ80i96C_5do1L8CWqA@mail.gmail.com Content-Type: text/plain; charset="utf-8"
Dear FS's experts,
I have run all my cross with v5.3 and hesitate to run all longitudinal process with v6. Does that make sense and will improve the process or would it be risky to do this ?
Many thanks for your lights !
Best regards, Matthieu