Hi Salil
have you checked the talairach.xfm to make sure it's accurate? There are options to recon-all to strip less - check out the help.
cheers Bruce On Fri, 5 Jul 2013, Salil Soman wrote:
Hi, I have a study for which the original T1 looks good, was obtained identically to dozens of other studies that went through freesurfer without problem. For some reason this study keeps getting stripped down to a little more than its brainstem. Then the rest of the processing fails with an error of retesselation. Log files attached. Any suggestions on how I can properly process this data?
Best wishes,
Sal