Hi Brad
how much disk space do you have free? It looks like not enough as the message I posted typically means you have run out of space on the sdisk
cheers Bruce On Thu, 13 Oct 2016, Brad Matushewski wrote:
Thank you, Bruce for the rapid reply. I am running Freesurfer on a (Windows 10 based), virtual machine. I installed / set it up according to the directions posted here: https://surfer.nmr.mgh.harvard.edu/fswiki/Installation/FreeSurferVirtualImag...
...specifically referring to the recommended memory suggestions of 4MB. Otherwise, I saw no other options for specifying memory requirements.
What is the nature of this memory error and how do I go about fixing it? I know that I have 305 Gb of HD.
-----Original Message----- From: freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@nmr.mgh.harvard.edu] On Behalf Of Bruce Fischl Sent: Thursday, October 13, 2016 9:43 AM To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] recon-all exited with ERRORS
Hi Brad
it looks like the recon failed as you ran out of disk space:
cvarput: ncid 5: No space left on device miicv_put: MINC package entry point nu_evaluate: crashed while running mincmath (termination status=768) nu_correct: crashed while running nu_evaluate (termination status=768)
as for what would have been next, that of course depends on what you want to study
cheers Bruce
On Thu, 13 Oct 2016, Brad Matushewski wrote:
I just tried to run my first recon-all.
What now?
Logo
Brad J. Matushewski, M.Sc., R.Kin., CSEP-CEP.
Laboratory for Brain & Heart Health School of Kinesiology Western University Room 402, Arthur & Sonia Labatt Health Sciences Building London, ON, Canada, N6A 5B9 Tel: (519) 661-2111 x 89066 Fax: (519) 850-2447
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer