Thanks for the quick response! I will begin basic processing and will surely have questions about how the sphere.reg file is used/how it applies.
Thanks again
Anson -----Original Message----- From: Bruce Fischl [mailto:fischl@nmr.mgh.harvard.edu] Sent: Thursday, June 07, 2012 12:40 PM To: Kairys, Anson Cc: 'freesurfer@nmr.mgh.harvard.edu' Subject: Re: [Freesurfer] Using an ROI and not correcting/"fixing" the rest of the image
Hi Anson
yes, that's ok as long as you make sure that the registration (sphere.reg) is ok for group results.
cheers Bruce On Thu, 7 Jun 2012, Kairys, Anson wrote:
Hi,
I am planning on looking at a specific region of interest, and I am wondering it is possible to only ?quality check? this region and leave the rest of the brain as is.
Meaning, can I save the time of going through every slice and re-assigning voxels for the entire brain and just focus on making sure the estimation of WM etc. is correct in my ROI?
Thanks a lot for any help you can provide.
Best wishes
Anson
Electronic Mail is not secure, may not be read every day, and should not be used for urgent or sensitive issues
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. ********************************************************** Electronic Mail is not secure, may not be read every day, and should not be used for urgent or sensitive issues