They might be sampling to different surfaces. To make sure they show the same exact thing, try mapping the data to the surface with mri_vol2surf doug On 09/25/2013 08:31 AM, Yang, Daniel wrote:
Dear FreeSurfer Experts,
I am trying to visualize fMRI activation (generated from fsl) on the fsaverage inflated surface, using mni152.register.dat.
It's odd that I find the results to be slightly different between tksurfer and freeview. However, I made sure that I am using the same threshold...
Judging from fslview, I think the result with freeview is more accurate -- is it due to tksurfer loading orig.mgz by default, and free view loading something else?
Thanks! Daniel
-- Yung-Jui "Daniel" Yang, PhD Postdoctoral Researcher Yale Child Study Center New Haven, CT (203) 737-5454
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