[Freesurfer] which step comes first

Catherine Bois

10 Dec 2012 10 Dec '12

1:04 p.m.

Hi,

when reconstructing the brains including manual edits, does the step that incorporates control points "come before" the white matter edits? Ie so if I do both control points and white matter edits, will the white matter edits be take into account even if I just use -autorecon -cp , and not -wm?

Thanks

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