I have no idea how to make it work with data that old. You can "fool" it by copying or soft linking lh.curv to lh.white.K. You can probably get it to at least finish.
On 06/06/2018 03:41 PM, Jamie Hanson wrote:
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Hello all,
I was trying to run qcache on some previously processed Freesurfer data from a colleague, but ran into some issues with missing files and wondered how best to proceed.
Details: -The data was processed with (Freesurfer) v4.5.0 and I would ideally like to not reprocess it with a newer version (to keep in concordance with past published work, and also it's a large number of subjects, n=800+). -The qcache flag was not used with the data previously (to my knowledge), so I was attempting to run this command: recon-all -s $subj -qcache -When I try that command, I get an error regarding a missing lh.white.K file.
I've uploaded the log file here: https://www.dropbox.com/s/94mnsy7wrps5ce2/recon-all.log?dl=0
I wondered if it was possible to complete qcache with the data as is? I searched on the list previously and saw one or two other folks had run into this issues; I, however, didn't see a final solution to things. Any thoughts or suggestions are greatly appreciated! Thanks much!
Best, Jamie.
-- Jamie Hanson Assistant Professor, Psychology Research Scientist, Learning Research and Development Center University of Pittsburgh Personal website: jamiehanson.org http://jamiehanson.org
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