Hi Doug, thanks for the response. Given that I already have the bhdr files, can I still use them? I did not get an error using -mcextreg, but I am not sure whether they were actually included. Caspar
2013/7/13 Douglas Greve greve@nmr.mgh.harvard.edu:
Hi Caspar, just put the regressors into a text file with number of rows equal to the number of time points doug
On 7/13/13 2:57 PM, Caspar M. Schwiedrzik wrote:
Hi! I am doing motion correction outside Freesurfer and would like to use motion nuisance regressors in my GLM, which I run in FSFAST. I am externally creating mcextreg.bhdr, mcextreg_000.blfoat and mcextreg_000.hdr for analyses in Freesurfer v4.5, but I was wondering whether I can use the same files for analysis in Freesurfer v5.x. Or should I convert them to something else? The documentation is slightly ambiguous about this. Thanks! Caspar _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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