External Email - Use Caution
Thanks for your response;
I had already mapped normalized volume to template surface, so now I want to map the desikan atlas into the vbm volume.
________________________________ Gönderen: Greve, Douglas N.,Ph.D. DGREVE@mgh.harvard.edu adına freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu Gönderildi: 11 Ekim 2018 Perşembe 18:26 Kime: freesurfer@nmr.mgh.harvard.edu Konu: Re: [Freesurfer] Ynt: Desikan Atlas in MNI Space
I'm not sure what you are trying to do. Do you want to map the vbm results to the surface and visualize the aparc (desikan atlas) or do you want to map the aparc into the vbm volume?
On 10/11/2018 09:59 AM, ece ulug wrote:
External Email - Use CautionHi,
May be i cannot tell well,
I would like to use the Desikan atlas, which is a surface-based atlas normally, as a volume template.
Generally Desikan_surface.gii file is accesible. Can I visualize VBM results correctly in for instances SPMglass brain using Desikan Atlas.nii?
Ece
*Gönderen:* ece ulug eceulug77@hotmail.com *Gönderildi:* 10 Ekim 2018 Çarşamba 12:27 *Kime:* freesurfer@nmr.mgh.harvard.edu *Konu:* Desikan Atlas in MNI Space
/Dear All,/ / I am a master student in Turkey. For my thesis; I have to do exactly this;
/ /*Desikan atlas (which I have in the tailarach space) in the MNI space, as a file (Desikan_mni.nii). I am aware that transforming from one space to the other is not a very good idea but nevertheless I would like to test some computations.
Anyone can attach/send a link/know of if exists such a file? the aparc+aseg.mgz in fsaverage is in mni305 space. will that work? */ /This is a mail dated 2014, freesurfer maillist, and I find this via internet./ /Desikan Atlas 'aparc+aseg.mgz' or .nii format where should I look for these file? / /And what is your opinion, is it good idea? / /(To transform Desikan atlas to mni space for visualization VBM results?) / /Thanks in advance/ /E. Ece Uluğ/
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