31 May
2020
31 May
'20
5:41 p.m.
Hi Jessica
in general if you specify .nii or .nii.gz as the extension of any output file we will write it in nifti format. This makes using mri_convert easy:
mri_convert any_volume.mgz any_volume.nii.gz
should work fine cheers Bruce
On Sun, 31 May 2020, Hua, Jessica wrote:
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Hi FreeSurfer experts,
Also in case the code is different, how would I convert my T1.mgz file to a .nii file to be used in DTI analyses?
Thanks!
Jessica
Jessica Hua, M.A. Cognitive and Emotional Control Lab Doctoral Candidate Clinical Psychology University of Missouri