External Email - Use Caution
Hi, I'm following the tutorial for dcmunpack, but am getting stuck here: Any ideas on what I'm doing wrong?
Thanks,Allison O. On Thursday, January 9, 2025 at 08:32:09 AM EST, Douglas N. Greve dgreve@mgh.harvard.edu wrote:
welcome to freesurfer! To convert from dicom to mgz, you can do a couple of things: use mri_convert, eg, mri_convert /path/to/dicomfile mprage.mgz Then run recon-all like recon-all -i mprage.mgz -s subjectname -all You can also use dcmunpack to unpack all volumes from a dicom directory See https://secure-web.cisco.com/1vtfYtMQHqK4cgAEOfqmyXfcH0c-qin6tLFTm01aIjCqzO0... for more info Also check out our tutorials
On 1/8/2025 4:18 PM, allio34218@aol.com wrote:
External Email - Use Caution Hi, I was wondering if anyone can point me to a good tutorial that would focus on how to upload and process DICOM data into FS / FreeView. I have a recent Triage Brain Atrophy report from NeuroQuant and would like to see how this compares to results generated in FS. I am a brand-new user and just installed FS on my computer.
Thank you, Allison O.
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://secure-web.cisco.com/1v3AhU4sCFksxXi09El30OxRM3mbSAJIcJsX7jL1vgHWGbM...
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://secure-web.cisco.com/1v3AhU4sCFksxXi09El30OxRM3mbSAJIcJsX7jL1vgHWGbM... The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at https://secure-web.cisco.com/1zm1-_scPPeE8Ql8XSw5-UxI7XyuScXAdlT1_gpU8dVLlYO... https://secure-web.cisco.com/1zm1-_scPPeE8Ql8XSw5-UxI7XyuScXAdlT1_gpU8dVLlYOPO-7aOVnNraZw3efFl4F7SbpUm5lPikzfwBhaBHKAjjYEvnl-_EL98kuc2q_CjLtjXs-rGMrHI_07OI3hmDX6h-xAxvO171x11vbpqo4ca2_xT5nCF3LmZf5zzUf_Xa5udGrL9N45k3NTOtzeBI8pj8Vt-xzjwgWYR9YsokD9p7I-ixsqww-PAzof9ha1nx4NXOK46d02eJJzIHNnAKevbkXZADE_5y-_1ZE5kVBOidSg7ULG3oCyY6iHAeXzdGiDtjCPb608REelMMUQPxceAH20xO7hsEDaZDPREyg/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline . Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.