Hi, You need to add an extension onto the file name, something like brain.mgz or brain.nii. The extension will tell it what format to save the output in. -Louis
On Fri, 31 Aug 2012, Borzello, Mia wrote:
Hi freesurfer family,
I am trying to create the inner skull boundary and ran: mri_watershed -atlas - surf -useSRAS mri.nii brain
However, after it finished running it said it was saving "brain", but "brain" was an unknown file type. Am i supposed to specify that somewhere?
Thanks in advance, m
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