Hi Eli
hmm, maybe you should just upload the subject and email us the voxel coords you are talking about?
Also, in general it is hard for us to help you unless you include more information. What exact command did you run? What was the screen output? What was in the recon-all.log?
cheers Bruce
On Wed, 1 Mar 2017, Rockers, Elijah D. wrote:
Couple of questions:
I edited wm.mgz following the instructions in the wiki guide, but it did not change anything after reconstruction. I am still using 5.3 right now, so maybe the guide is wrong for me. What is the brush value supposed to be? I used 255 but it did not extend the white matter surface to include my edits. I checked to make sure they saved correctly, they did, but the surface didn't change. Any ideas?
The reason I am editing wm.mgz is to try to include some cortex that was left out of the pial surface. I don't suppose there's any way to fix this without editing wm.mgz? Because the white matter surface actually looks fine the way it is.
Thanks, Eli
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