Thanks, that should be helpful.
Is there a way to use mris_anatomical_stats on the .annot file that the cluster correction creates within the qdec analysis folder, or do I need to map the annotation to a subject in order to use mris_anatomical_stats? If I try to run mris_anatomical_stats on the .annot file in the qdec analysis folder the program tries to look for /mri/wm.mgz, which doesn't exist.
On 4/9/10 3:26 PM, "Nick Schmansky" nicks@nmr.mgh.harvard.edu wrote:
or you can use the -c option of mris_anatomical_stats to extract the colortable from the .annot file, edit the colors in that colortable, and then specify that colortable with the -colortable option of tksurfer.
n.
On Fri, 2010-04-09 at 14:49 -0400, Douglas N Greve wrote:
The only "easy" way to do it is to create individual labels for each cluster (using the label option or mri_annotation2label), then use mris_label2annot and specify your own color table.
doug
Dankner, Nathan (NIH/NIMH) [F] wrote:
Hi all,
I am running cluster corrections on data and attempting to display the resulting cluster maps. Is it possible to make all of the clusters in an annotation the same color? And if so, how? As it stands now, all of the clusters are given a different color. Thanks for your help,
Nathan
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