Hi, Bruce
Do you mean that if the tumor located in the subcortical area, there is not large impact to reconstruction; if the tumor located in the cortical regions, there will affect the cortex reconstruction?
Another question is that I have MRI data from stroke patients. However, there are different lesions in the brain across the patients, including cerebral cortex and subcortical area. How could I perform reconstruction analysis?
Best, Feng
发件人：Bruce Fischl fischl@nmr.mgh.harvard.edu 发送时间：2015-10-01 23:11 主题：Re: [Freesurfer] Calculate the cortical thickness in patients with brain tumor 收件人："Freesurfer support list"freesurfer@nmr.mgh.harvard.edu 抄送：
Hi Feng
it depends on where the tumor is
cheers Bruce On Wed, 30 Sep 2015, chenhf_uestc wrote:
Hi, freesurfer experts,
If my data came from the patients with brain tumors, could I perform recon-all analyses to calculate cortical thickness, surface area and so on. If not, could I mask the brain region with tumor and then conduct such analyses? I think the tumor might lead to the inaccuracy of cortical reconstruction
Best, Feng
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