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Dear Douglas,
And is there a recommended way to compute a z value from the cluster p-value? With voxel-wise measure of z value, do you mean a z value of a particular voxel, for instance, the voxel with the maximum p value in a cluster?
Thank you very much.
Regards,
Agurne
El vie, 26 feb 2021 a las 14:38, Douglas N. Greve (dgreve@mgh.harvard.edu) escribió:
There is no z value for the cluster itself, but you could take the cluster p-value and use it to compute a z value. Or do you want a voxel-wise measure of z value?
On 2/24/2021 4:00 AM, Agurne Sampedro Calvete wrote:
External Email - Use CautionDear Freesurfer experts,
In relation to the previous question, could I obtain a Z value of the significant cluster obtained by opening in freeview the z.mgh and place the cursor on the point with the highest value? Is there another way to obtain a Z value or alternatively, a t-value?
Thank you very much in advance,
Best regards,
Agurne
El mar, 23 feb 2021 a las 13:25, Agurne Sampedro Calvete (< a.sampedro@deusto.es>) escribió:
Dear Freesurfer experts,
I am doing a longitudinal repeated measures analysis and after correcting for multiple comparisons with Z Monte Carlo simulation (with the "mri_glmfit-sim ... --cache 3 ..." command), I obtained a significant cluster for my experimental group (pre-post).
In order to obtain the information for displaying the results in the paper, I am looking at the cluster summary table. I have seen that some papers include the t value in addition to the p value, cluster size and coordinates, but how can I obtain the t value? Does it appear in the cluster summary table or elsewhere?
Thank you very much in advance,
Kind regards,
Agurne
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