no, but if you add the flag -time to recon-all, you will get lines like this in the recon-all.log:
time:: 0:11.49 cmd:: mris_anatomical_stats
where you can grep on 'time::' to get command run times, although you'd have to add together some commands to get times for a stage.
note: runtimes can vary quite a bit, some subjects take a lot longer to correct than others, and the newer intel nehalem architecture runs in less than half the time as the older amd opteron and p4s.
n
On Wed, 2010-07-28 at 17:19 -0400, Chris Watson wrote:
Hello, Do you guys have a script that parses recon-all.log and spits out the processing time for each step? Something that would be similar to this in recon-all --help: -<no>motioncor < 5 min -<no>nuintensitycor 3 min -<no>talairach 4 min -<no>normalization 3 min -<no>skullstrip 1 min -<no>gcareg 8 min -<no>canorm 1 min -<no>careg 10 hours
and so on.
Thanks, Chris _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer