26 Nov
2008
26 Nov
'08
1:18 p.m.
Hello, I would like to register a 2D EPI oblique axial slice to a 3D MPRAGE and am hoping that Freesurfer will help me do this. I have not had any luck with other fMRI software packages. Caveat: Each subject's EPI axial slice was taken parallel to his/her specific hippocampal longitudinal axis and the angle is unknown. Therefore, I have a low-res 2D axial slice at an unknown angle and a high-res 3D MPRAGE.
Is Freesurfer capable of finding and applying the appropriate transformation? Specific suggestions would be greatly appreciated.
Best, Susie