Do you mean aparcstats2table?
On 12/05/2016 10:15 AM, Hao wen wrote:
Hello, freesurfer experts:
I have a question, recently, I use the aparcstats2label comamnd, and get the result file, and I use tksurfer to display the desikan atlas(?h.aparc.annot), and I want to corresponds the labels between this two, but in my aparcstats2label result file, i can not find the corpuscallosum which is the No.4 label in tksurfer, to bespecific, here is the label ID in desikan atlas in tksurfer:
aparc_lables= ['unknown', 'bankssts', 'caudalanteriorcingulate', 'caudalmiddlefrontal', 'corpuscallosum', 'cuneus', 'entorhinal', 'fusiform', 'inferiorparietal', 'inferiortemporal', 'isthmuscingulate', 'lateraloccipital', 'lateralorbitofrontal', 'lingual', 'medialorbitofrontal', 'middletemporal', 'parahippocampal', 'paracentral', 'parsopercularis', 'parsorbitalis', 'parstriangularis', 'pericalcarine', 'postcentral', 'posteriorcingulate', 'precentral', 'precuneus', 'rostralanteriorcingulate', 'rostralmiddlefrontal', 'superiorfrontal', 'superiorparietal', 'superiortemporal', 'supramarginal', 'frontalpole', 'temporalpole', 'transversetemporal', 'insula'] which has 36 labels, and I dont understand which label is unknow.... on the contrary, the result from aparcstat2table have 36 columns(includint subject_id and meanthickness), so bacially, they have just 34 labels add one 'unknown', it should have 35 labels, but I did not find the lable 'corpuscallosum', Can someone help me??? The result file for aparcstat2table file is attached:) Thanks in advance
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer