Hi Sam,
you could either do this on a structure-by-structure basis using the aseg labels, or in Tal coords, or potentially in one of the nonlinear coordinate systems we provide (if that were needed). mri_vol2vol can be used for tal. Let us know which you prefer and we'll point you in the right direction
cheers, Bruce On Fri, 29 May 2009, Samantha Clark wrote:
Hi,
I was wondering if there was a way to compare t1 or t2 maps between 2 subjects using the volume brain as opposed to the surface brain.
To be specific I have two brains which are T1 maps. I want to see the differences in T1's between the two brains. How would i go about doing this.
I hope i am clear in my question.
--sam