if your orig volume is in orig/001.mgz, then you can do:
mri_convert -rl orig/001.mgz brainmask.mgz brainmask_transformed.mgz
cheers, Bruce
On Thu, 31 Aug 2006, tulu wrote:
Dear Freesurfer experts,
I use freesurfer and when I finish recon-all autorecon1, I would like to transform Brainmask.mgz image back to origin coordination. How to do it ?
Thank replay
Kl chen