Re: [Freesurfer] The error about recon-all -s subjid -autorecon1

Hi Antoine

is your partition full? Bruce On Mon, 19 Apr 2010, Antoine Leflon wrote:

sorry this error was :

********FINAL ITERATIVE TEMPLATE DEFORMATION******** Compute Local values csf/gray Fine Segmentation...40 iterations mghRead: encountered error executing: 'zcat /usr/local/freesurfer/subjects/s2/mri/T1.mgz',frame -1, errno 12

  mri_strip_skull: done peeling brain

Brain Size = 1657531 voxels, voxel volume = 1.000 mm3 = 1657531 mmm3 = 1657.531 cm3

mri_watershed Error: read failed

Linux qq-desktop 2.6.28-15-generic #51-Ubuntu SMP Mon Aug 31 13:33:16 UTC 2009 i686 GNU/Linux

recon-all exited with ERRORS at Wed Sep 9 15:08:15 CST 2009

---

Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer