Hi Krish!
Thanks for the reply, I was actually able to solve the problem with a general stats2table script provided here by Jamaan Alghamdi:
http://www.easyneuroimaging.com/2011/03/using-bash-script-to-convert-freesur...
Best, Rob
Hi Tenny
That's troubling! What does it give you if you run it with a -v switch?
Is the SUBJECTS_DIR correct? It's one directory above 01_bay6/ and
02_bay6/ directories..
-Krish
On Dec 7, 2011, at 3:10 PM, tenny@nmr.mgh.harvard.edu wrote:
Hi All, I apologize if this is a simple fix, I am very very new to freesurfer. I am trying to combine the ?h.aparc.stats of a number of subjects into a
table file that I can load into excel.
I have run the following: "aparcstats2table --hemi lh --subjects 01_bay6 02_bay6 --meas thickness --tablefile aparc_stats.txt" and am receiving the following message: "ERROR: The stats file ../subjects/01_bay6/stats/lh.aparc.stats is not
found or is too small to be a valid statsfile"
I have checked the content of the file in question and it appears to
have
the same format as the aparc.stats files displayed in the wiki. Is
there a
way to go around this problem or perhaps some easy solution that I am
unaware of? I couldn't find anything in the wiki.
Thanks! Rob _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer