Use mri_label2vol to transfer the wmparc.mgz into the DTI space, then use mri_segstats with --seg-erode 1 to compute summaries of the MD in each region doug
On 02/03/2014 10:45 PM, Rotem Saar wrote:
Dear freesurfer experts,
Can u please advise on how to extract the mean diffusivity value for each ROI from the wmparc file ? I know how to extract the FA value, but interested in the MD value also for the same regions.
Thanks Rotem Rotem Saar-Ashkenazy Department of Brain and Cognitive Science Ben Gurion University of the Negev Beer-Sheva 84105 Israel
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer