Hi Freesurfer experts,
In my project, I need to have a view of several specific ROIs which already specified after running re-con all based on Destrieux atlas. In this purpose, I tried to run mris_label2annot command to create ROIs in annot format to be viewed in Tksurfer by overlaying on pial surface (before this step, I created label files). In this process I got an error : need to specify color table file. I do not know how I can create and modify color table file here. May you guide me in this process to create color table and whether or not I have been following right steps? In advance, I'd appreciate your time and consideration.
Bests,
Faezeh Vedaei Research Associate CoGeNT Lab, Department of Neurology Michigan State University
On Tue, Feb 9, 2016 at 2:01 PM, Faeze Vedaei faezevedaei@gmail.com wrote:
Hello Freesurfer experts,
I am Faezeh Vedaei a research assistant in a neurology lab at the Michigan State University. In my project I want to have a 3D view of ROIs which I just extracted by AFNI, after I executed recon-all. I would like to help me how can I overlay some specific ROIs on a 3D brain map in Freeview? In advance, I would appreciate your time and consideration.
Regards, Faezeh Vedaei