Hi Gabor
if you fix the aseg labels I think it should correct the midline problem (rerun autorecon2-wm autorecon3 I think)
cheers Bruce
On Mon, 25 Sep 2017, Gabor Perlaki wrote:
Here are links to images showing the bad midline cut. Could anybody help me how to solve this issue? The main cause seems to be asymmetric lateral ventricles.
Best, Gabor
2017-09-23 8:18 GMT+02:00 Gabor Perlaki petzinger.gabor@gmail.com: Dear all, Here is my question again. Somehow, it didn't appear on the Freesurfer forum. I'm resending it without the attachments.
I've a subject, where the midline cut is bad (see the attached pictures), therefore the segmented left lateral ventricle also includes considerable number of voxels from the right one. Is it possible to correct it somehow?
-- Gabor Perlaki research associate Diagnostic Center of Pécs H-7623 Pécs, Rét str. 2. Tel.: 0036-30-2084367 E-mail: petzinger.gabor@gmail.com