Hi Everybody,
I have a problem with mri_convert when I try to convert an image (a mask) from .img (analyze) to .mnc (minc). using the simple command mri_convert image.img image.mnc what I get is that the result (image.mnc is different from the original image). and if I make the diff of the mri_info's of the two output, this is what I get
< Volume information for mask.img < type: analyze4d ---
Volume information for mask.mnc type: MINC
6,9c6,9 < fov: 256.000 < xstart: -128.0, xend: 128.0 < ystart: -128.0, yend: 128.0 < zstart: -32.0, zend: 32.0 ---
fov: 240.000 xstart: -120.0, xend: 120.0 ystart: -120.0, yend: 120.0 zstart: -64.0, zend: 64.0
What I don't understand is also why the analyze format has a zspace of 64 (I have 64 for slices with 2mm thickness, shouldn't it be 128?). Can anybody please suggest me where I can look for the reason of this problem?
thanks,
-stefano