Hi James
after running recon-all you can use mri_cnr to measure CNR (which is usually more interesting than SNR). Motion is harder. Martin investigated this at some point, but I'm not sure where he left it
cheers Bruce On Thu, 31 Aug 2017, James Welsh wrote:
Dear Freesurfer experts, I want to inquire if there are any tools in freesurfer that can help to evaluate T1 quality regarding motion and SNR.
Thanks! James