30 Mar
2021
30 Mar
'21
11:02 p.m.
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Hi everyone,
I need to confirm if the steps below are correct, so I would like to ask freesurfer experts help. By using the Left-Cerebral-White-Matter mask imported from freesurfer as a seed I created a tract end points density image of the arcuate fasciculus in a NIFTI format (first figure). I want to display the image on the same subject’s white matter surface. So, I wrote the command as follows
mri_vol2surf --src DensityMAP.nii.gz --out filename.mgh --hemi lh --surf white --out_type mgh --regheader subject_id
The output as seen in the second figure.
Thanks
Mudathir
