thanks Rudolph
and what if you wanted the topological (shortest distance along the surface) between two specific vertices? so, say i have two known locations and i want to know how separated they are over the surface - is there a command where i can input the two vertices and the output is separation distance?
thanks
vitaly
On Tue, Dec 28, 2010 at 12:05 PM, Rudolph Pienaar rudolph@nmr.mgh.harvard.edu wrote:
If you run 'mris_curvature_stats' on the surface (see 'mris_curvature_stats -u' for usage help), one of the summary rows in the report is the average inter vertex distance.
You could probably just do:
$>mris_curvature_stats -F smoothwm <subjID> lh curv
given appropriate SUBJECTS_DIR env variable which will give the average vertex separation distance on the lh.smoothwm surface (plus some stats on the lh.curv curvature file).
On 12/27/2010 10:22 PM, YUMI MAEDA wrote:
HI,
I am wondering if there is a way to calculate inter vertex distance on fsaverage surface with freesurfer. thanks for your help.
YUMI
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Rudolph Pienaar, M.Eng, D.Eng / email: rudolph@nmr.mgh.harvard.edu MGH/MIT/HMS Athinoula A. Martinos Center for Biomedical Imaging 149 (2301) 13th Street, Charlestown, MA 02129 USA
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.