Hi Carolin
Where did you upload the images? Bruce
From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu On Behalf Of Caroline Chwiesko Sent: Friday, March 26, 2021 6:08 PM To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] How to edit GM when WM is ok
External Email - Use Caution Hello Bruce, I wrote a week ago to this mailing list to ask for advice about how to edit an issue where an entire Gyrus will not be captured by the pial surface. I uploaded some images to show what that looks like. I just wanted to send a friendly reminder to make sure it won't be forgotten ;) Thank you very much for any help!
Cheers Carolin
On Fri, Mar 19, 2021 at 4:54 PM Caroline Chwiesko <cchwiesk@uci.edumailto:cchwiesk@uci.edu> wrote: Hi Bruce, thank you very much for taking a look at that. I uploaded 3 images in different orientations. I can not see any white matter.
Cheers Carolin
On Fri, Mar 19, 2021 at 7:26 AM Fischl, Bruce <BFISCHL@mgh.harvard.edumailto:BFISCHL@mgh.harvard.edu> wrote: Hi Carolin
Yes, I guess send along images using all 3 orientations. There has to be some white matter there somewhere…. Cheers Bruce
From: freesurfer-bounces@nmr.mgh.harvard.edumailto:freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edumailto:freesurfer-bounces@nmr.mgh.harvard.edu> On Behalf Of Caroline Chwiesko Sent: Friday, March 19, 2021 12:28 AM To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edumailto:freesurfer@nmr.mgh.harvard.edu> Subject: [Freesurfer] How to edit GM when WM is ok
External Email - Use Caution Hello Freesurfer experts,
i am doing some editing after recon-all. I have the issue that one gyrus is not captured by the pial surface. There is no wm that is wrong and that i could correct. It looks like this gyrus has a weird angle so there is actually no WM visible. How can such an error be corrected? I am happy to send a couple images if needed.
Thank you very much in advance for any help! Cheers Carolin _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurferhttps://secure-web.cisco.com/1niNiJqZPAU_BwdWuyKfUgvGJumNQAo6mbJhKeNlfs_2Mh5cDQppJl75VfBAoN-1GJ7kWtojMqeH4mHdQpW-8urrYDir0w2VJlTIW_rRBQO_1BOrfNByyysdYt6w5HVkogl_nH59vslj0dkR46uyo79pfPIzjBBOTIh2w56yH-ILMNEPvd3-V6iwIHqfpO_51s3XbpUhR4-XbS66RF70eirz5HFqAMqfbsgy4EN2KyvfKXYwbicVqnp2QPZ-c89nArCB2gGomICANaSQBJA173Q/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer