Hi all
I am running recon-all localGI One subjects image is not getting processed and crashes repeatedly with message that there may be a topological defect in a particular vertex. It asks me to check euler number. The wiki indicates that this crash is a known issue and restrating _mris_compute_lgi must solve this.
My questions are 1. how to check the euler number and how to interpret this number in terms of topological defects? 2. mris_compute_lgi does not find lh.pial surface when I TRY TO RESTART - what should I do? I used mris_compute_lgi subjid/surf/lh.pial
Many thanks in advance Lena _______________________________________________________ Lena Palaniyappan Clinical Lecturer & Honorary StR | Division of Psychiatry ( University of Nottingham) South Block 'A' floor| Queens Medical Centre | Nottingham | NG7 2UH
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