fsl is no longer distributed with freesurfer, with the exception of 'flirt', which is included in the freesurfer/bin dir.
On Thu, 2010-04-29 at 11:49 -0400, Douglas N Greve wrote:
Look in scripts/recon-all.env
doug
Ed Gronenschild wrote:
Hi,
The FreeSurfer package is bundled with a subset of FSL. However, I think most of us also installed the full FSL package. The global variable FSL_DIR points to the directory of FSL.
My question is if it is possible to read from recon-all log files which FSL package is used?
Ed
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer