Right, the dents and dimples in the inflated surface are meaningless.
doug
Rajagopalan, Venkateswaran wrote:
Thanks Doug, as there is dent (where i placed my marks) in my image when compared to the image in documentation page so i thought there is something wrong with that. Thanks for the clarification so it is only the pial and WM surfaces i have to look for.
Thanks again venkateswaran
-----Original Message----- From: Douglas N Greve [mailto:greve@nmr.mgh.harvard.edu] Sent: Thu 2/18/2010 12:04 PM To: Rajagopalan, Venkateswaran Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Inflated_surface
What is the problem? Just looking at those inflated surface, they look ok to me. Remember, the inflated surfaces are just for display. The only thing that matters is that the white and pial surfaces are accurate.
doug
Rajagopalan, Venkateswaran wrote:
Hello All,
I am new to freesurfer and i am kind of sensing there is some problem in my inflated surface (i compared it to the one available in the documentation page).I have placed some marks on lh inflated to find out the coordinates these are x = (-28.5, -59.2, 21.1), n = (-0.5, -0.3, 0.8),x = (-31.0, -66.9, 17.0), n = (-0.5, -0.4, 0.8).I am attaching JPEG of rh and lh inflated images (10kb each).Can anyone please tell me what is the problem here and how use these coordinates to fix that problem like is there a direct connection between these coordinates and WM surface where you identify the problem.
Thanks in advance.
venkateswaran
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