If you want to upsample to the anatomical space, use mri_vol2vol (run with --help to get examples)
On 4/16/19 5:54 AM, Juhyoung Ryu wrote:
External Email - Use CautionHi Douglas, Thank you for the response.
I tried to figure out your suggestion, but as i understand about bbregister, it provides registration of functional space to anatomical space in $subjects_dir. As what i want to do is registration of anatomical data to functional space by upsampling process, I have no idea how to use the command. Additionally, I don’t want alignment between anatomical and functional data.
Could you please tell me more about your suggestion?
Thank you very much in advance! Juhyoung
On 15 Apr 2019, at 11:42 PM, Greve, Douglas N.,Ph.D. DGREVE@mgh.harvard.edu wrote:
Use bbregister to create the register.dat file. Run it with --help to get docs on how to use it.
On 4/15/2019 7:51 AM, Juhyoung Ryu wrote:
External Email - Use CautionHi all,
I’d like to upsampling anatomical ROI data, what i created using ribbon file, to the functional resolution. As the anatomical and functional data were aligned, I need only re-slice processing except for coregistration.
I tried upsampling using ‘mir_label2vol’, but i have no idea to create ‘register.dat’ file. ‘mri_convert’ with —voxsize flag provides upsampling, but that was all.
Would you help me to re-slice ROI data to the functional coordinate?
Thank you in advance, Juhyoung
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