14 Apr
2014
14 Apr
'14
10:10 a.m.
Dear Freesurfers,
I have run several subjects using the -T2pial flag, to correct for dura. For several subjects the pial surface was badly positioned after the -T2pial flag was used (these errors did not occur when the flag was not used, in the same subject, see PDF, left vs right panel).
I was wondering if adding this flag might be problematic in some patient groups, like cerebrovascular disease or multiple sclerosis, with regard to T2 (hyperintense) lesions.
Best, Ruthger